ajvardata

Data type AjPVar

Holds the var itself, plus associated information.

Alias name(s)

Name
AjSVar
AjOVar

Attributes

Name	Type	Description
Id	AjPStr	Id of term
Db	AjPStr	Database name from input
Setdb	AjPStr	Database name from command line
Full	AjPStr	Full name
Qry	AjPStr	Query for re-reading
Formatstr	AjPStr	Input format name
Filename	AjPStr	Original filename
Lines	AjPStr*	Full text
Fpos	ajlong	File position
Format	AjEnum	Input format enum
Count	ajuint	Number of lines read

Data type AjPVarin

Holds the input specification and information needed to read the var and possible further entries

Alias name(s)

Name
AjSVarin
AjOVarin

Attributes

Name	Type	Description
Input	AjPTextin	General text input object
VarData	void*	Format data for reuse, e.g. multiple term input (unused in current code)

Data type AjPVarall

Inherits an AjPVar but allows more variations to be read from the same input by also inheriting the AjPVarin input object.

Alias name(s)

Name
AjSVarall
AjOVarall

Attributes

Name	Type	Description
Var	AjPVar	Current variation
Varin	AjPVarin	Variation input for reading next
Totterms	ajulong	Count of terms so far
Count	ajuint	Count of terms so far
Multi	AjBool	True if multiple values are expected
Returned	AjBool	if true: Variation object has been returned to a new owner and is not to be deleted by the destructor
Padding	char[4]	Padding to alignment boundary

Data type AjPVarAccess

Holds information needed to read a var entry from a database. Access methods are defined for each known database type.

Var entries are read from the database using the defined database access function, which is usually a static function within ajvardb.c

This should be a static data object but is needed for the definition of AjPVarin.

Alias name(s)

Name
AjSVarAccess
AjOVarAccess

Attributes

Name	Type	Description
Name	const char*	Access method name used in emboss.default
Access	(AjBool*)	Access function
AccessFree	(AjBool*)	Access cleanup function
Qlink	const char*	Supported query link operators
Desc	const char*	Description
Alias	AjBool	Alias for another name
Entry	AjBool	Supports retrieval of single entries
Query	AjBool	Supports retrieval of selected entries
All	AjBool	Supports retrieval of all entries
Chunked	AjBool	Supports retrieval of entries in chunks