ALIGNMENT MULTIPLE

 

Multiple sequence alignment

Program nameDescription
edialign Local multiple alignment of sequences
emma Multiple sequence alignment (ClustalW wrapper)
infoalign Display basic information about a multiple sequence alignment
plotcon Plot conservation of a sequence alignment
prettyplot Draw a sequence alignment with pretty formatting
showalign Display a multiple sequence alignment in pretty format
tranalign Generate an alignment of nucleic coding regions from aligned proteins
eomega Multiple sequence alignment (ClustalO wrapper)
eomegapp Profile with profile (ClustalO wrapper)
eomegash Sequence with HMM (ClustalO wrapper)
eomegasp Sequence with profile (ClustalO wrapper)
mse Multiple Sequence Editor