ajquerydata

Data type AjPQueryField

Holds data needed for a specific field query This must refer to an field name (id, acc or any other queriable field) and the query string including wildcards specified by the user

Alias name(s)

Name
AjSQueryField
AjOQueryField

Attributes

Name	Type	Description
Field	AjPStr	Field name
Wildquery	AjPStr	Query Wildcard
Link	AjEQryLink	Link to previous queries

Data type AjPQuery

Holds data needed to interpret an entry specification This can refer to an entry name (or "id"), and accession number or other queriable items.

AjPQuery is created with the entry specification part of a USA (Uniform Sequence Address) or euivalent for other data types. The syntax is currently related to that used by SRS release 5.1.

Alias name(s)

Name
AjSQuery
AjOQuery

Attributes

Name	Type	Description
SvrName	AjPStr	Server name used by EMBOSS
DbName	AjPStr	Database name used by EMBOSS
DbAlias	AjPStr	Database name used by access method
DbType	AjPStr	Database type
QueryFields	AjPList	Query field list
ResultsList	AjPList	Query results list
ResultsTable	AjPTable	Query results table
Method	AjPStr	Name of access method
Qlinks	AjPStr	Supported query link operators
Formatstr	AjPStr	Name of input format for parser
IndexDir	AjPStr	Index directory
Directory	AjPStr	Data directory
Filename	AjPStr	Individual filename
Exclude	AjPStr	File wildcards to exclude (spaced)
DbFields	AjPStr	Query fields (plus id and acc)
DbFilter	AjPStr	Database filter (query) fields
DbReturn	AjPStr	Database attribute (returned data) fields
DbIdentifier	AjPStr	Database primary identifier field
DbAccession	AjPStr	Database secondary identifier field
DbUrl	AjPStr	Query URL
DbProxy	AjPStr	Proxy host
DbHttpVer	AjPStr	HTTP version
ServerVer	AjPStr	Server version
Field	AjPStr	Query field
QryString	AjPStr	Query term
Application	AjPStr	External application command
Fpos	ajlong	File position from fseek
TextAccess	void*	Text access function : see ajtextdb.h
Access	void*	Datatype-specific access function : see ajseqdb.h ajobodb.h and others
QryData	void*	Private data for access function
QueryType	AjEQryType	Enumerated query type
DataType	AjEDataType	Enumerated datatype general scope
QryDone	AjBool	Has the query been done yet
SetServer	AjBool	True if server data has been set
SetDatabase	AjBool	True if database data has been set
SetQuery	AjBool	True if query data has been set
Wild	AjBool	True if query contains '*' or '?'
CaseId	AjBool	True if ID match is case-sensitive
HasAcc	AjBool	True if entries have acc field
CountEntries	ajuint	Number of entries processed
TotalEntries	ajuint	Number of entries found
Padding	char[4]	Padding to alignment boundary

Data type AjPQueryList

Includes data from the original query (

Alias name(s)

Name
AjSQueryList
AjOQueryList

Attributes

Name	Type	Description
Qry	AjPStr	Current query
Formatstr	AjPStr	Format name from original query
Format	ajuint	Format enumeration
Padding	char[4]	Padding to alignment boundary