Datatypes:
| AjPFile | Obo Term output |
| none | Miscellaneous functions |
Sections:
| obo term outputs | Output |
Functions:
| ajObooutWrite | Write an OBO term in a named format |
AjBool ajObooutWrite (
AjPOutfile outf,
const AjPObo obo
);
| Type | Name | Read/Write | Description |
|---|---|---|---|
| AjPOutfile | outf | Modify | Output file |
| const AjPObo | obo | Input | Obo term object |
| AjBool | RETURN | True on success |
From EMBOSS 6.4.0
Sections:
| Casts |
Functions:
| ajObooutprintBook | Reports the obo term format internals as Docbook text |
| ajObooutprintHtml | Reports the internal data structures |
| ajObooutprintText | Reports the internal data structures |
| ajObooutprintWiki | Reports the obo term output format internals as wikitext |
void ajObooutprintBook (
AjPFile outf
);
| Type | Name | Read/Write | Description |
|---|---|---|---|
| AjPFile | outf | Modify | Output file |
| void | RETURN |
From EMBOSS 6.4.0
void ajObooutprintHtml (
AjPFile outf
);
| Type | Name | Read/Write | Description |
|---|---|---|---|
| AjPFile | outf | Modify | Output file |
| void | RETURN |
From EMBOSS 6.4.0
void ajObooutprintText (
AjPFile outf,
AjBool full
);
| Type | Name | Read/Write | Description |
|---|---|---|---|
| AjPFile | outf | Modify | Output file |
| AjBool | full | Input | Full report (usually ajFalse) |
| void | RETURN |
From EMBOSS 6.4.0
void ajObooutprintWiki (
AjPFile outf
);
| Type | Name | Read/Write | Description |
|---|---|---|---|
| AjPFile | outf | Modify | Output file |
| void | RETURN |
From EMBOSS 6.4.0
Functions:
| ajObooutformatFind | Looks for the specified format(s) in the internal definitions and returns the index. |
| ajObooutformatTest | Tests whether a named OBO output format is known |
AjBool ajObooutformatFind (
const AjPStr format,
ajint* iformat
);
| Type | Name | Read/Write | Description |
|---|---|---|---|
| const AjPStr | format | Input | Format required. |
| ajint* | iformat | Output | Index |
| AjBool | RETURN | ajTrue on success. |
From EMBOSS 6.4.0
AjBool ajObooutformatTest (
const AjPStr format
);
| Type | Name | Read/Write | Description |
|---|---|---|---|
| const AjPStr | format | Input | Format |
| AjBool | RETURN | ajTrue if formats was accepted |
From EMBOSS 6.4.0
Functions:
| ajObooutExit | Cleans up obo term outputinternal memory |
void ajObooutExit (
void
);
| Type | Name | Read/Write | Description |
|---|---|---|---|
| void | RETURN |
From EMBOSS 6.4.0