void ajNamPrintSvrAttr (
AjPFile outf,
AjBool full
);
| Type | Name | Read/Write | Description |
|---|---|---|---|
| AjPFile | outf | Modify | Output file |
| AjBool | full | Input | Full output if AjTrue |
| void | RETURN |
From EMBOSS 6.4.0
void ajNamPrintDbAttr (
AjPFile outf,
AjBool full
);
| Type | Name | Read/Write | Description |
|---|---|---|---|
| AjPFile | outf | Modify | Output file |
| AjBool | full | Input | Full output if AjTrue |
| void | RETURN |
From EMBOSS 2.5.0
void ajNamPrintRsAttr (
AjPFile outf,
AjBool full
);
| Type | Name | Read/Write | Description |
|---|---|---|---|
| AjPFile | outf | Modify | Output file |
| AjBool | full | Input | Full output if AjTrue |
| void | RETURN |
From EMBOSS 2.7.0
AjBool ajNamSvrGetAttrC (
const AjPStr name,
const char* attribute,
AjPStr* value
);
| Type | Name | Read/Write | Description |
|---|---|---|---|
| const AjPStr | name | Input | server name |
| const char* | attribute | Input | server attribute name |
| AjPStr* | value | Output | attribute value |
| AjBool | RETURN | true if found |
From EMBOSS 6.4.0
AjBool ajNamSvrGetAttrS (
const AjPStr name,
const AjPStr attribute,
AjPStr* value
);
| Type | Name | Read/Write | Description |
|---|---|---|---|
| const AjPStr | name | Input | server name |
| const AjPStr | attribute | Input | server attribute name |
| AjPStr* | value | Output | attribute value |
| AjBool | RETURN | true if found |
From EMBOSS 6.4.0
AjPList ajNamSvrGetAttrlist (
const AjPStr name
);
| Type | Name | Read/Write | Description |
|---|---|---|---|
| const AjPStr | name | Input | server name |
| AjPList | RETURN | Nam-value list |
From EMBOSS 6.4.0
AjBool ajNamSvrGetdbAttrC (
const AjPStr name,
const AjPStr dbname,
const char* attribute,
AjPStr* value
);
| Type | Name | Read/Write | Description |
|---|---|---|---|
| const AjPStr | name | Input | server name |
| const AjPStr | dbname | Input | database name |
| const char* | attribute | Input | database attribute name |
| AjPStr* | value | Output | attribute value |
| AjBool | RETURN | true if found |
From EMBOSS 6.4.0
AjBool ajNamSvrGetdbAttrS (
const AjPStr name,
const AjPStr dbname,
const AjPStr attribute,
AjPStr* value
);
| Type | Name | Read/Write | Description |
|---|---|---|---|
| const AjPStr | name | Input | server name |
| const AjPStr | dbname | Input | database name |
| const AjPStr | attribute | Input | database attribute name |
| AjPStr* | value | Output | attribute value |
| AjBool | RETURN | true if found |
From EMBOSS 6.4.0
AjBool ajNamSvrDetails (
const AjPStr name,
AjPStr* type,
AjPStr* scope,
AjBool* id,
AjBool* qry,
AjBool* all,
AjPStr* comment,
AjPStr* svrversion,
AjPStr* methods,
AjPStr* defined,
AjPStr* cachedirectory,
AjPStr* cachefile,
AjPStr* url
);
| Type | Name | Read/Write | Description |
|---|---|---|---|
| const AjPStr | name | Input | Server name |
| AjPStr* | type | Output | datatype - 'Protein', 'Nucleic' etc. |
| AjPStr* | scope | Output | datatype scope Sequence Features etc. |
| AjBool* | id | Output | ajTrue = can access single entries |
| AjBool* | qry | Output | ajTrue = can access wild/query entries |
| AjBool* | all | Output | ajTrue = can access all entries |
| AjPStr* | comment | Output | comment about server |
| AjPStr* | svrversion | Output | Server version |
| AjPStr* | methods | Output | server access methods formatted |
| AjPStr* | defined | Output | server definition file short name |
| AjPStr* | cachedirectory | Output | cache directory name |
| AjPStr* | cachefile | Output | cache file name |
| AjPStr* | url | Output | server URL |
| AjBool | RETURN | ajTrue if server details were found |
From EMBOSS 6.4.0
AjBool ajNamDbGetAttrC (
const AjPStr name,
const char* attribute,
AjPStr* value
);
| Type | Name | Read/Write | Description |
|---|---|---|---|
| const AjPStr | name | Input | database name |
| const char* | attribute | Input | database attribute name |
| AjPStr* | value | Output | attribute value |
| AjBool | RETURN | true if found |
From EMBOSS 6.4.0
AjBool ajNamDbGetAttrS (
const AjPStr name,
const AjPStr attribute,
AjPStr* value
);
| Type | Name | Read/Write | Description |
|---|---|---|---|
| const AjPStr | name | Input | database name |
| const AjPStr | attribute | Input | database attribute name |
| AjPStr* | value | Output | attribute value |
| AjBool | RETURN | true if found |
From EMBOSS 6.4.0
AjPList ajNamDbGetAttrlist (
const AjPStr name
);
| Type | Name | Read/Write | Description |
|---|---|---|---|
| const AjPStr | name | Input | database name |
| AjPList | RETURN | Nam-value list |
From EMBOSS 6.4.0
AjBool ajNamDbDetails (
const AjPStr name,
AjPStr* type,
AjBool* id,
AjBool* qry,
AjBool* all,
AjPStr* comment,
AjPStr* release,
AjPStr* methods,
AjPStr* defined
);
| Type | Name | Read/Write | Description |
|---|---|---|---|
| const AjPStr | name | Input | Database name |
| AjPStr* | type | Output | sequence type - 'P' or 'N' |
| AjBool* | id | Output | ajTrue = can access single entries |
| AjBool* | qry | Output | ajTrue = can access wild/query entries |
| AjBool* | all | Output | ajTrue = can access all entries |
| AjPStr* | comment | Output | comment about database |
| AjPStr* | release | Output | database release date |
| AjPStr* | methods | Output | database access methods formatted |
| AjPStr* | defined | Output | database definition file short name |
| AjBool | RETURN | ajTrue if database details were found |
From EMBOSS 1.0.0
void ajNamDebugOrigin (
void
);
| Type | Name | Read/Write | Description |
|---|---|---|---|
| void | RETURN |
From EMBOSS 1.13.0
void ajNamDebugServers (
void
);
| Type | Name | Read/Write | Description |
|---|---|---|---|
| void | RETURN |
From EMBOSS 6.4.0
void ajNamDebugDatabases (
void
);
| Type | Name | Read/Write | Description |
|---|---|---|---|
| void | RETURN |
From EMBOSS 1.13.0
void ajNamDebugResources (
void
);
| Type | Name | Read/Write | Description |
|---|---|---|---|
| void | RETURN |
From EMBOSS 2.7.0
void ajNamDebugVariables (
void
);
| Type | Name | Read/Write | Description |
|---|---|---|---|
| void | RETURN |
From EMBOSS 2.7.0
void ajNamDebugAliases (
void
);
| Type | Name | Read/Write | Description |
|---|---|---|---|
| void | RETURN |
From EMBOSS 6.4.0
void ajNamListListServers (
AjPList svrnames
);
| Type | Name | Read/Write | Description |
|---|---|---|---|
| AjPList | svrnames | Output | Str List of names to be populated |
| void | RETURN |
From EMBOSS 6.4.0
void ajNamListListDatabases (
AjPList dbnames
);
| Type | Name | Read/Write | Description |
|---|---|---|---|
| AjPList | dbnames | Output | Str List of names to be populated |
| void | RETURN |
From EMBOSS 1.0.0
void ajNamListListResources (
AjPList rsnames
);
| Type | Name | Read/Write | Description |
|---|---|---|---|
| AjPList | rsnames | Output | Str List of names to be populated |
| void | RETURN |
From EMBOSS 2.7.0
AjBool ajNamIsDbname (
const AjPStr name
);
| Type | Name | Read/Write | Description |
|---|---|---|---|
| const AjPStr | name | Input | character string to find in getenv list |
| AjBool | RETURN | True if name was defined. |
From EMBOSS 3.0.0
AjBool ajNamGetenvC (
const char* name,
AjPStr* value
);
| Type | Name | Read/Write | Description |
|---|---|---|---|
| const char* | name | Input | character string to find in getenv list |
| AjPStr* | value | Output | String for the value. |
| AjBool | RETURN | True if name was defined. |
From EMBOSS 2.9.0
AjBool ajNamGetenvS (
const AjPStr name,
AjPStr* value
);
| Type | Name | Read/Write | Description |
|---|---|---|---|
| const AjPStr | name | Input | character string to find in getenv list |
| AjPStr* | value | Output | String for the value. |
| AjBool | RETURN | True if name was defined. |
From EMBOSS 6.1.0
AjBool ajNamGetAliasC (
const char* name,
AjPStr* value
);
| Type | Name | Read/Write | Description |
|---|---|---|---|
| const char* | name | Input | character string find in hash table. |
| AjPStr* | value | Output | Str for the value. |
| AjBool | RETURN | True if name was defined. |
From EMBOSS 6.4.0
AjBool ajNamGetAliasS (
const AjPStr namestr,
AjPStr* value
);
| Type | Name | Read/Write | Description |
|---|---|---|---|
| const AjPStr | namestr | Input | character string find in hash table. |
| AjPStr* | value | Output | Str for the value. |
| AjBool | RETURN | True if name was defined. |
From EMBOSS 6.4.0
AjBool ajNamGetValueC (
const char* name,
AjPStr* value
);
| Type | Name | Read/Write | Description |
|---|---|---|---|
| const char* | name | Input | character string find in hash table. |
| AjPStr* | value | Output | Str for the value. |
| AjBool | RETURN | True if name was defined. |
From EMBOSS 1.0.0
AjBool ajNamGetValueS (
const AjPStr name,
AjPStr* value
);
| Type | Name | Read/Write | Description |
|---|---|---|---|
| const AjPStr | name | Input | character string find in hash table. |
| AjPStr* | value | Output | String for the value. |
| AjBool | RETURN | True if name was defined. |
From EMBOSS 6.1.0
AjBool ajNamServer (
const AjPStr name
);
| Type | Name | Read/Write | Description |
|---|---|---|---|
| const AjPStr | name | Input | character string find in hash table. |
| AjBool | RETURN | true if server name is valid. |
From EMBOSS 6.4.0
AjBool ajNamDatabase (
const AjPStr name
);
| Type | Name | Read/Write | Description |
|---|---|---|---|
| const AjPStr | name | Input | character string find in hash table. |
| AjBool | RETURN | true if database name is valid. |
From EMBOSS 1.0.0
AjBool ajNamAliasDatabase (
AjPStr* Pname
);
| Type | Name | Read/Write | Description |
|---|---|---|---|
| AjPStr* | Pname | Modify | character string to find in hash table. |
| AjBool | RETURN | true if database name is valid. |
From EMBOSS 6.4.0
AjBool ajNamDatabaseServer (
const AjPStr name,
const AjPStr server
);
| Type | Name | Read/Write | Description |
|---|---|---|---|
| const AjPStr | name | Input | Database name to find for server |
| const AjPStr | server | Input | Server name |
| AjBool | RETURN | true if database name is valid. |
From EMBOSS 6.4.0
AjBool ajNamAliasServer (
AjPStr* Pname,
const AjPStr server
);
| Type | Name | Read/Write | Description |
|---|---|---|---|
| AjPStr* | Pname | Modify | character string to find in hash table. |
| const AjPStr | server | Input | Server name |
| AjBool | RETURN | true if database name is valid. |
From EMBOSS 6.4.0
ajuint ajNamSvrCount (
const AjPStr server
);
| Type | Name | Read/Write | Description |
|---|---|---|---|
| const AjPStr | server | Input | Server name |
| ajuint | RETURN | Number of databases |
From EMBOSS 6.4.0
void ajNamSvrListListDatabases (
const AjPStr server,
AjPList dbnames
);
| Type | Name | Read/Write | Description |
|---|---|---|---|
| const AjPStr | server | Input | Server name |
| AjPList | dbnames | Output | Str List of names to be populated |
| void | RETURN |
From EMBOSS 6.4.0
void ajNamInit (
const char* prefix
);
| Type | Name | Read/Write | Description |
|---|---|---|---|
| const char* | prefix | Input | Default prefix for all file and variable names. |
| void | RETURN |
From EMBOSS 1.0.0
void ajNamExit (
void
);
| Type | Name | Read/Write | Description |
|---|---|---|---|
| void | RETURN |
From EMBOSS 1.0.0
AjBool ajNamSvrTest (
const AjPStr svrname
);
| Type | Name | Read/Write | Description |
|---|---|---|---|
| const AjPStr | svrname | Input | Server name. |
| AjBool | RETURN | ajTrue on success. |
From EMBOSS 6.4.0
AjBool ajNamSvrGetUrl (
const AjPStr svrname,
AjPStr* url
);
| Type | Name | Read/Write | Description |
|---|---|---|---|
| const AjPStr | svrname | Input | Server name. |
| AjPStr* | url | Output | URL returned. |
| AjBool | RETURN | ajTrue if success. |
From EMBOSS 6.4.0
const char* ajNamQueryGetDatatypeC (
const AjPQuery qry
);
| Type | Name | Read/Write | Description |
|---|---|---|---|
| const AjPQuery | qry | Input | Database query |
| const char* | RETURN | Database type |
From EMBOSS 6.4.0
const AjPStr ajNamQueryGetUrl (
const AjPQuery qry
);
| Type | Name | Read/Write | Description |
|---|---|---|---|
| const AjPQuery | qry | Input | Database query |
| const AjPStr | RETURN | URL value |
From EMBOSS 6.4.0
AjBool ajNamSvrGetDbalias (
const AjPStr svrname,
AjPStr* dbalias
);
| Type | Name | Read/Write | Description |
|---|---|---|---|
| const AjPStr | svrname | Input | Server name. |
| AjPStr* | dbalias | Output | Alias returned. |
| AjBool | RETURN | ajTrue if success. |
From EMBOSS 6.4.0
AjBool ajNamSvrData (
AjPQuery qry,
ajuint argc,
...
);
| Type | Name | Read/Write | Description |
|---|---|---|---|
| AjPQuery | qry | Modify | Query structure with at least dbname filled in |
| ajuint | argc | Input | Number of additional attribute name/value pairs |
| ... | vararg | Vararg | Variable length argument list |
| AjBool | RETURN | ajTrue if success. |
From EMBOSS 6.4.0
AjBool ajNamSvrQuery (
AjPQuery qry
);
| Type | Name | Read/Write | Description |
|---|---|---|---|
| AjPQuery | qry | Modify | Query structure with at least svrname filled in |
| AjBool | RETURN | ajTrue if success. |
From EMBOSS 6.4.0
AjBool ajNamDbTest (
const AjPStr dbname
);
| Type | Name | Read/Write | Description |
|---|---|---|---|
| const AjPStr | dbname | Input | Database name. |
| AjBool | RETURN | ajTrue on success. |
From EMBOSS 1.0.0
AjBool ajNamDbGetType (
const AjPStr dbname,
ajuint* itype
);
| Type | Name | Read/Write | Description |
|---|---|---|---|
| const AjPStr | dbname | Input | Database name. |
| ajuint* | itype | Output | Database enumerated type |
| AjBool | RETURN | ajTrue if success. |
From EMBOSS 6.4.0
AjBool ajNamDbGetUrl (
const AjPStr dbname,
AjPStr* url
);
| Type | Name | Read/Write | Description |
|---|---|---|---|
| const AjPStr | dbname | Input | Database name. |
| AjPStr* | url | Output | URL returned. |
| AjBool | RETURN | ajTrue if success. |
From EMBOSS 1.0.0
AjBool ajNamDbGetDbalias (
const AjPStr dbname,
AjPStr* dbalias
);
| Type | Name | Read/Write | Description |
|---|---|---|---|
| const AjPStr | dbname | Input | Database name. |
| AjPStr* | dbalias | Output | Alias returned. |
| AjBool | RETURN | ajTrue if success. |
From EMBOSS 1.0.0
AjBool ajNamDbGetIndexdir (
const AjPStr dbname,
AjPStr* indexdir
);
| Type | Name | Read/Write | Description |
|---|---|---|---|
| const AjPStr | dbname | Input | Database name. |
| AjPStr* | indexdir | Output | Directory path returned. |
| AjBool | RETURN | ajTrue if success. |
From EMBOSS 6.4.0
AjBool ajNamQuerySetDbalias (
AjPQuery qry
);
| Type | Name | Read/Write | Description |
|---|---|---|---|
| AjPQuery | qry | Modify | Database query. |
| AjBool | RETURN | ajTrue if success. |
From EMBOSS 6.4.0
AjBool ajNamDbData (
AjPQuery qry,
ajuint argc,
...
);
| Type | Name | Read/Write | Description |
|---|---|---|---|
| AjPQuery | qry | Modify | Query structure with at least dbname filled in |
| ajuint | argc | Input | Number of additional attribute name/value pairs |
| ... | vararg | Vararg | Variable length argument list |
| AjBool | RETURN | ajTrue if success. |
From EMBOSS 2.4.0
AjBool ajNamDbQuery (
AjPQuery qry
);
| Type | Name | Read/Write | Description |
|---|---|---|---|
| AjPQuery | qry | Modify | Query structure with at least dbname filled in |
| AjBool | RETURN | ajTrue if success. |
From EMBOSS 1.0.0
AjBool ajNamFileQuery (
AjPQuery qry
);
| Type | Name | Read/Write | Description |
|---|---|---|---|
| AjPQuery | qry | Modify | Query structure with no database name |
| AjBool | RETURN | ajTrue if success. |
From EMBOSS 6.4.0
const AjPStr ajNamValueInstalldir (
void
);
| Type | Name | Read/Write | Description |
|---|---|---|---|
| const AjPStr | RETURN | Install directory root |
From EMBOSS 6.0.0
const AjPStr ajNamValuePackage (
void
);
| Type | Name | Read/Write | Description |
|---|---|---|---|
| const AjPStr | RETURN | Package name |
From EMBOSS 6.0.0
const AjPStr ajNamValueSystem (
void
);
| Type | Name | Read/Write | Description |
|---|---|---|---|
| const AjPStr | RETURN | Version number |
From EMBOSS 6.2.0
const AjPStr ajNamValueVersion (
void
);
| Type | Name | Read/Write | Description |
|---|---|---|---|
| const AjPStr | RETURN | Version number |
From EMBOSS 6.0.0
const AjPStr ajNamValueRootdir (
void
);
| Type | Name | Read/Write | Description |
|---|---|---|---|
| const AjPStr | RETURN | Package level root directory |
From EMBOSS 6.0.0
const AjPStr ajNamValueBasedir (
void
);
| Type | Name | Read/Write | Description |
|---|---|---|---|
| const AjPStr | RETURN | Base directory |
From EMBOSS 6.0.0
AjBool ajNamResolve (
AjPStr* name
);
| Type | Name | Read/Write | Description |
|---|---|---|---|
| AjPStr* | name | Output | String |
| AjBool | RETURN | ajTrue on success. |
From EMBOSS 1.0.0
AjBool ajNamSetControl (
const char* optionName
);
| Type | Name | Read/Write | Description |
|---|---|---|---|
| const char* | optionName | Input | option name |
| AjBool | RETURN | ajTrue if option was recognised |
From EMBOSS 2.7.0
AjBool ajNamRsAttrValueC (
const char* name,
const char* attribute,
AjPStr* value
);
| Type | Name | Read/Write | Description |
|---|---|---|---|
| const char* | name | Input | resource name |
| const char* | attribute | Input | resource attribute |
| AjPStr* | value | Output | resource value |
| AjBool | RETURN | true if found |
From EMBOSS 3.0.0
AjBool ajNamRsAttrValueS (
const AjPStr name,
const AjPStr attribute,
AjPStr* value
);
| Type | Name | Read/Write | Description |
|---|---|---|---|
| const AjPStr | name | Input | resource name |
| const AjPStr | attribute | Input | resource attribute |
| AjPStr* | value | Output | resource value |
| AjBool | RETURN | true if found |
From EMBOSS 6.4.0
AjBool ajNamRsListValue (
const AjPStr name,
AjPStr* value
);
| Type | Name | Read/Write | Description |
|---|---|---|---|
| const AjPStr | name | Input | resource name |
| AjPStr* | value | Output | resource value |
| AjBool | RETURN | true if found |
From EMBOSS 3.0.0