Protein functional sites

Program nameDescription
sigcleave Reports on signal cleavage sites in a protein sequence
tmap Predict and plot transmembrane segments in protein sequences
echlorop Reports presence of chloroplast transit peptides
elipop Prediction of lipoproteins
esignalp Reports protein signal cleavage sites
etmhmm Reports transmembrane helices
siggenlig Generates ligand-binding signatures from a CON file
sigscan Generates hits (DHF file) from a signature search
topo Draws an image of a transmembrane protein