[EMBOSS] output of program "digest" as input for program "pepstats" ?
gbottu at ben.vub.ac.be
Thu Aug 25 08:18:43 EDT 2005
You can ask digest for a "Report Format" of type "List File", which you
can give as input to pepstats or iep (the peptides will be analyzed as
individual sequences and the results given the one aftert the other, they
are not merged).
I have no experience with Taverna and hence cannot tell you exactly how
to. I know that at the command line you would have to :
digest mysequence -rformat=listfile -outfile=myreport
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