EMNU build under EMBOSS 2.1.0
mathog at mendel.bio.caltech.edu
Thu Jan 3 15:18:19 EST 2002
Trying to get EMBASSY bits working under EMBOSS 2.1.0 on Solaris 8
mostly successful build of EMBOSS 2.1.0 using Forte cc.) Copied entire
directory from 1.12.0 EMBOSS to 2.1.0. Tried gmake in EMNU 1.0.4.
BOOM, it couldn't
find X11 symbols. Tossed that, installed new 1.0.5 distribution clean
directory. In EMNU did
(or ./configure --with-x, same phenotype)
boom, it couldn't find X11 symbols again. After dropping into the
it was doing:
/bin/sh ../libtool --mode=link gcc -O -o emnu emnu.o
../../../nucleus/libnucleus.la -lmenu -lform -lmenu -lform -lsocket
-lm -lnsl -lncurses
which you'll notice has no -lX11 on the end, and of course it couldn't
link in the X11 bits. So I ran this manually with -lX11 added to the end
and it worked.
I just checked, emnu under 1.12.0 still will gmake.
Why is it that in EMBOSS 1.12.0 EMNU knows to use the X11 lib but has
to do so in 2.1.0???
mathog at caltech.edu
Manager, Sequence Analysis Facility, Biology Division, Caltech
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