Analyzing Large Sequences
zno6 at cdc.gov
Wed Feb 21 16:54:18 EST 2001
I am using EMBOSS 1.9.1 on a Solaris 2.8 machine.
I would like to analyze large viruses, ~185 kb.
I seem to be having some odd errors running the getorf
program on sequences of this size. No error messages, but
getorf is not finding orfs that I know are there.
What is the maximum size sequence that EMBOSS can handle?
I looked through the documentation but could not find info.
Is the defined as integer (32767)?
Centers for Disease Control and Prevention
1600 Clifton Rd, NE
Atlanta, GA 30333
ssammons at cdc.gov
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