Alignments | embaln | Sequence alignment |
Comments | embcom | Complexity |
Consensus sequences | embcons | Consensus |
Data file utilities | embdata | Data files |
Database indexing using EMBL-CD indices | embdbi | Database index |
Domainatrix package algorithms | embdmx | Domainatrix methods |
Domain algorithms | embdomain | Domain methods |
EST algorithms | embest | EST methods |
Exit calls for applications | embexit | Exit methods |
Groups of applications | embgroup | Groups |
Isoelectric point utilities | embiep | Protein properties |
Indexing databases using B+ trees | embindex | Indexing |
Initialising internals | embinit | Initialization |
Comparison matrices | embmat | Comparison matrices |
Miscellaneous methods | embmisc | Miscellaneous methods |
Molecular fragment algorithms | embmol | Molecular fragments |
N-mer (word) algorithms | embnmer | Word (n-mer) methods |
Pattern matching algorithms | embpat | Pattern matching methods |
Pattern list file reading | embpatlist | Pattern list input methods |
Protein databank (PDB) structure file utilities | embpdb | Protein data bank |
Properties of protein sequences | embprop | Sequence properties |
Reading data files | embread | Reading data files |
Showing sequences in pretty formats | embshow | Show (display) methods |
Signatures of protein domains | embsig | Signature methods |
Word matching algorithms | embword | Word methods |
Include file for all applications | emboss | Master include file |